Basic Information
Symbol
hsa_LIN54_0001000
RNA Class
transcript (circRNA)
Alias
hsa-LIN54_0053
Host gene
LIN54
Type of circRNA
Exon-Exon
Location (GRCh37)
4:83857134-83891622
UCSC (hg19)
Location (GRCh38)
4:82935981-82970469
UCSC (hg38)
External Database
Secondary Structure
Generated by RNAfold
Minimum free energy (MFE) structure:
Secondary structure that contributes a minimum of free energy.
Secondary structure that contributes a minimum of free energy.
Ensemble properties:
Thermodynamic properties of the Boltzmann ensemble.
Thermodynamic properties of the Boltzmann ensemble.
Minimum free energy
-68.40 kcal/mol
Thermodynamic ensemble
Free Energy:
-75.85 kcal/mol
Frequency:
0.0000
Diversity:
108.57
MFE Structure Visualization
Structure Prediction
MFE Structure Prediction
(((((((((((.....((((......((....)).....))))..................(((((((..((.....................))..))))))).........((.((.(((....))).)).)).......((((..(((.........))).....))))))).))))))))((...((((....(((((...))))).))))....(((.(((((...)))))...)))((((((((..(((.....(((((...(((......))).....)))))..)))...)))).))))...(((((((.(.(((((....(((..(.....)..))).......)).))).)...)))))))))
Thermodynamic Ensemble Prediction
(((((((((((,,,..(({{......((....)}.....||}}..........,.},...,(((((((..((.....................}}..))))))).........((.{{.{({....))).,}.}}.......(({{..||,,.,......}}}.....}}}}}}}.})))))))({,..((((,...(((((...))))).}}||{{{.,((.,((((...}))))}.})))|{|{{{{{..(((.....(((((...((({...}))).,}}}},}})).,)))...||||,|||,.,{{(({(((.,.{{|||.,,.||,..|,,,,,),.)}),,,....,,.})),)...)))))))))
Forensic Context
No forensic context available.