Basic Information
Symbol
hsa_LIN54_0001300
RNA Class
transcript (circRNA)
Alias
hsa-LIN54_0055
Host gene
LIN54
Type of circRNA
Exon-Exon
Location (GRCh37)
4:83857432-83860889
UCSC (hg19)
Location (GRCh38)
4:82936279-82939736
UCSC (hg38)
External Database
Secondary Structure
Generated by RNAfold
Minimum free energy (MFE) structure:
Secondary structure that contributes a minimum of free energy.
Secondary structure that contributes a minimum of free energy.
Ensemble properties:
Thermodynamic properties of the Boltzmann ensemble.
Thermodynamic properties of the Boltzmann ensemble.
Minimum free energy
-62.90 kcal/mol
Thermodynamic ensemble
Free Energy:
-68.20 kcal/mol
Frequency:
0.0002
Diversity:
69.76
MFE Structure Visualization
Structure Prediction
MFE Structure Prediction
((((.............))))((((((........))).......((((.((....))...))))......(((((((....((((((....((((((..((.............((((....))))(((((((((........))))).))))))....))))))..)))))).((((((....(((.(((.((..((((..(((.........))).....)))).)).)))..))).....))))))..(((((...)))))....)))).)))..........)))
Thermodynamic Ensemble Prediction
((((.............))))(((,,,........|||....,,,|({{{(({...,,...))))......((((({{....{(((((....{{((({,,,,,.,,.,.......((((....))))(((((((((........)))))},)))))...,))))))..)))))|,{,,,(({{.{(((.,,|}||.}|||,.,|||..,....,,|},.....))}},}).,}}..},}.....}}))},..(((((...)))))..,,)))).)))..........)))
Forensic Context
No forensic context available.