Basic Information
Symbol
hsa_LIN54_0003400
RNA Class
transcript (circRNA)
Alias
hsa-LIN54_0058
Host gene
LIN54
Type of circRNA
Intron-Exon-Intron
Location (GRCh37)
4:83864251-83867627
UCSC (hg19)
Location (GRCh38)
4:82943098-82946474
UCSC (hg38)
External Database
Secondary Structure
Generated by RNAfold
Minimum free energy (MFE) structure:
Secondary structure that contributes a minimum of free energy.
Secondary structure that contributes a minimum of free energy.
Ensemble properties:
Thermodynamic properties of the Boltzmann ensemble.
Thermodynamic properties of the Boltzmann ensemble.
Minimum free energy
-72.40 kcal/mol
Thermodynamic ensemble
Free Energy:
-80.39 kcal/mol
Frequency:
0.0000
Diversity:
112.59
MFE Structure Visualization
Structure Prediction
MFE Structure Prediction
((((.(((.....(((.((((.((.....((((((((((((((.....................)))))))))))))).............(((((((........)).)))))((((((((...........)))))))).(((......)))..(((((((....((..((((....((((((.((.(((......)))..((((........))))..)).))))))...))))..)).))))))).....)).)))).)))..)))))))(..((.......((((.((.(((((..(((.(((...)))..)))..))))).))))))........))..)
Thermodynamic Ensemble Prediction
((((.(({.{{,{((({(,{,.,,.{{{{({{{{{{{{|||||......}}}}}},...|{,,,||,,}}}|||||||{{{{,,.......(((((((........))}})))),(((((((.,,....}...)))))))|{(((,{......).}}}||(({....,,,}||||}}.}|||||,..,.,{{......,},.,(((({{,,.,,,||}}.,}}.}})))}..,)))}..))})))),,,.....})}}})),,,)}.)))))))(..{(.,,....((((.((.(((((..(((.(({...,,,..)))..))))).))))))....,}..))..)
Forensic Context
No forensic context available.