Basic Information
Symbol
hsa_LIN54_0003800
RNA Class
transcript (circRNA)
Alias
hsa-LIN54_0047
Host gene
LIN54
Type of circRNA
Intron-Exon-Intron
Location (GRCh37)
4:83867411-83882471
UCSC (hg19)
Location (GRCh38)
4:82946258-82961318
UCSC (hg38)
External Database
Secondary Structure
Generated by RNAfold
Minimum free energy (MFE) structure:
Secondary structure that contributes a minimum of free energy.
Secondary structure that contributes a minimum of free energy.
Ensemble properties:
Thermodynamic properties of the Boltzmann ensemble.
Thermodynamic properties of the Boltzmann ensemble.
Minimum free energy
-27.50 kcal/mol
Thermodynamic ensemble
Free Energy:
-31.22 kcal/mol
Frequency:
0.0024
Diversity:
31.02
MFE Structure Visualization
Structure Prediction
MFE Structure Prediction
((.....(((((.((.((....)))).))))).(((..(((((.((((.(((....(((((..((((..........((((......))))...........................................................(((((...........)))))(((((((.(......).))))))).)))).))))).))))))))))))..)))............))((........))
Thermodynamic Ensemble Prediction
((...,.(((((.((.((....)))).))))).(((..(((((.((((.(((.,{,(((((..((((,,,.......,|||......,,,,...........................................................(((((.,,....}...)))))(((((((.{......).))))))).))}).))))),))))))))))))..)))........,...))((........))
Forensic Context
No forensic context available.