Forensic RNA Knowledge Base

Basic Information

Symbol

hsa_PIP5K1A_0002000

RNA Class

circRNA

Alias

hsa_circ_0014116 hsa_circPIP5K1A_002 hsa-PIP5K1A_0009

Host gene

PIP5K1A

Type of circRNA

Exon-Exon

Location (GRCh37)

1:151196721-151199876 UCSC (hg19)

Location (GRCh38)

1:151224245-151227400 UCSC (hg38)

External Database

circbank

circBase

Secondary Structure

Generated by RNAfold

Minimum free energy (MFE) structure:
Secondary structure that contributes a minimum of free energy.

Ensemble properties:
Thermodynamic properties of the Boltzmann ensemble.

Minimum free energy

-28.8 kcal/mol

Thermodynamic ensemble

Free Energy: -32.37 kcal/mol

Frequency: 0.0030

Diversity: 39.45

MFE Structure Visualization

Structure Prediction

MFE Structure Prediction

.....(((((((((((.(...(.(((((...((((((...((((.((.....)).))))...))))))((((((...((((((...))))))..))))))........))))).)...).))))))))...)))..................

Thermodynamic Ensemble Prediction

.....(((((((((((.(...{.(((((...(((((({{{({{..{{...,,)),}})),,.}}}||,{(((((...{(((((...))))))..)))))),,......))))).,...).))))))))...}}}}...,.............

Basic Information

Secondary Structure

Structure Prediction

Forensic Context