Forensic RNA Knowledge Base

Basic Information

Symbol

hsa_MACF1_0007900

RNA Class

transcript (circRNA)

Alias

hsa-MACF1_0369

Host gene

MACF1

Type of circRNA

Exon-Exon

Location (GRCh37)

1:39696854-39748046 UCSC (hg19)

Location (GRCh38)

1:39231182-39282374 UCSC (hg38)

External Database

circbank

Secondary Structure

Generated by RNAfold

Minimum free energy (MFE) structure:
Secondary structure that contributes a minimum of free energy.

Ensemble properties:
Thermodynamic properties of the Boltzmann ensemble.

Minimum free energy

-57.50 kcal/mol

Thermodynamic ensemble

Free Energy: -61.24 kcal/mol

Frequency: 0.0023

Diversity: 50.63

MFE Structure Visualization

Structure Prediction

MFE Structure Prediction

.....(((...(((.(((....))).....(((((...((((((.((..........(((...(((((((..(((((....)))))...))))))).....)))....(((((......))))))).))))))...)))))((((.((......(((((................))))))).))))(((((....(((....)))....))))).....)))...)))

Thermodynamic Ensemble Prediction

.....(((...(((,(({....}},..,..(((((...((((((.,{...,.,,...{{|..,(((((((..(((((....)))))...))))))},,...}}|.,..(((((......)))))}},))))))...))))}((((.((......(((({................))))))).))))(((((....(((....)))....))))).....)))...)))

Basic Information

Secondary Structure

Structure Prediction

Forensic Context