Basic Information
Symbol
hsa_NDE1_0009800
RNA Class
transcript (circRNA)
Alias
hsa-MYH11_0241
Host gene
MYH11
Type of circRNA
Intron-Intron
Location (GRCh37)
16:15815312-15818047
UCSC (hg19)
Location (GRCh38)
16:15721455-15724190
UCSC (hg38)
External Database
Secondary Structure
Generated by RNAfold
Minimum free energy (MFE) structure:
Secondary structure that contributes a minimum of free energy.
Secondary structure that contributes a minimum of free energy.
Ensemble properties:
Thermodynamic properties of the Boltzmann ensemble.
Thermodynamic properties of the Boltzmann ensemble.
Minimum free energy
-56.40 kcal/mol
Thermodynamic ensemble
Free Energy:
-60.17 kcal/mol
Frequency:
0.0022
Diversity:
41.99
MFE Structure Visualization
Structure Prediction
MFE Structure Prediction
(...........((.(((((.((..(((((((.(((...(((........((((((....(((((......))))).))))))((((((((((...(((..((........)).....)))...))))))))))((((.((((......)))).)))).......)))..)))))))))).)).)))))...)))(((.........)))
Thermodynamic Ensemble Prediction
(...........{{.(((((.((..(((((((,({(,,,({(...,,...{(((({,...(((({......))))).)))))|((((((((((...(((..((........)).....)))...))))))))))|(((.((({......}))).)))|.......}}}..}))))))))).}}.))))}...,,.,{|.........}))
Forensic Context
No forensic context available.