Forensic RNA Knowledge Base

Basic Information

Symbol

hsa_NFIX_0002900

RNA Class

transcript (circRNA)

Alias

hsa-NFIX_0014

Host gene

NFIX

Type of circRNA

Exon-Exon

Location (GRCh37)

19:13183861-13201204 UCSC (hg19)

Location (GRCh38)

19:13073047-13090390 UCSC (hg38)

External Database

circbank

Secondary Structure

Generated by RNAfold

Minimum free energy (MFE) structure:
Secondary structure that contributes a minimum of free energy.

Ensemble properties:
Thermodynamic properties of the Boltzmann ensemble.

Minimum free energy

-45.50 kcal/mol

Thermodynamic ensemble

Free Energy: -47.38 kcal/mol

Frequency: 0.0471

Diversity: 47.39

MFE Structure Visualization

Structure Prediction

MFE Structure Prediction

.....((((.........))))..........(((((.((((...........)))).....((.((((.(((....))).))))))......)))))((((.(((...((((.(((((((.((((.............))))...)))))))((.(((.....))).)).)))).))).))))

Thermodynamic Ensemble Prediction

.....((({.........}))}......,.,.(((({.(,((........,,.||||,....((.((((.(((....))).))))))......}}}||((((.{((...((((.(({{{{(.{,{{............,})})...)))))))((.(({.....})).)).)))).))).))})

Basic Information

Secondary Structure

Structure Prediction

Forensic Context