Basic Information
Symbol
hsa_NIPSNAP3B_0000100
RNA Class
transcript (circRNA)
Alias
hsa_circ_0001879
hsa_circNIPSNAP3A_008
hsa-NIPSNAP3B_0008
Host gene
NIPSNAP3B
Type of circRNA
Intergenic-Exon
Location (GRCh37)
9:107521543-107535189
UCSC (hg19)
Location (GRCh38)
9:104759262-104772908
UCSC (hg38)
Secondary Structure
Generated by RNAfold
Minimum free energy (MFE) structure:
Secondary structure that contributes a minimum of free energy.
Secondary structure that contributes a minimum of free energy.
Ensemble properties:
Thermodynamic properties of the Boltzmann ensemble.
Thermodynamic properties of the Boltzmann ensemble.
Minimum free energy
-42.30 kcal/mol
Thermodynamic ensemble
Free Energy:
-47.55 kcal/mol
Frequency:
0.0002
Diversity:
48.83
MFE Structure Visualization
Structure Prediction
MFE Structure Prediction
(((((....(((..(((....(((.(((..((((.....))))...)))..)))....)))..)))..)))))...((((((....)))).))...............................................................((((((.(((.((((((.....)))))).)))))))))((((((((((((((((((((....)))((....)).))))..)))))).)))))))
Thermodynamic Ensemble Prediction
{,,((,..,((,..,||}.}}|,(,((,{{(({({,,..}}}}..,}}}..,,,..,.},|,,||,..,)))),..||,|||,.,,)),)}))...............................................................{(((((.(((.((((((.....)))))).))}))))))(((((((((((((((((..(....,,,,.....),.))))}..))))),}))))))
Forensic Context
No forensic context available.