Forensic RNA Knowledge Base

Basic Information

Symbol

hsa_PABPN1_0000400

RNA Class

transcript (circRNA)

Alias

hsa-PABPN1_0012

Host gene

PABPN1

Type of circRNA

Exon-Exon

Location (GRCh37)

14:23790973-23791464 UCSC (hg19)

Location (GRCh38)

14:23321764-23322255 UCSC (hg38)

External Database

Generated by RNAfold

Minimum free energy (MFE) structure:
Secondary structure that contributes a minimum of free energy.

Ensemble properties:
Thermodynamic properties of the Boltzmann ensemble.

Minimum free energy

-29.00 kcal/mol

Thermodynamic ensemble

Free Energy: -32.22 kcal/mol

Frequency: 0.0054

Diversity: 45.94

MFE Structure Visualization

MFE Structure Prediction

.....((..(((((.((..((((.((((..(((.....))))))).)))))).)))))..)).....((.((..(((((...(((......))).......((((....))))....)))))...))...))

Thermodynamic Ensemble Prediction

.....((.{(((,,.(({{(((,.,,||}}|||,....)))),)).}},},,.|||,|,,((.,.{(((.,,..|||||.}}||.},,.,.}.},......||||,...||||.....}))).},,..,...