Basic Information

Symbol
hsa_chr13_0121200
RNA Class
transcript (circRNA)
Alias
hsa_circ_0100274 hsa_circPDS5B_070
Host gene
PDS5B
Type of circRNA
Intergenic-Intergenic
Location (GRCh37)
13:33169819-33192945 UCSC (hg19)
Location (GRCh38)
13:32595682-32618808 UCSC (hg38)
External Database
circbank circBase

Secondary Structure

Generated by RNAfold
Minimum free energy (MFE) structure:
Secondary structure that contributes a minimum of free energy.
Ensemble properties:
Thermodynamic properties of the Boltzmann ensemble.
Minimum free energy
-35.60 kcal/mol
Thermodynamic ensemble
Free Energy: -39.59 kcal/mol
Frequency: 0.0015
Diversity: 38.56
MFE Structure Visualization
Structure Prediction
MFE Structure Prediction
(((((((((.((((((......)))).(((((((.(((((((....((((....((((((.(((....))).))))))....))))....................................................................((((((..((((....))))..))))))(((((.(.........).)))))...))))))).))))))).....)).)))))))))((......))
Thermodynamic Ensemble Prediction
(((((((((.((((((......)))).(((((((.(((((({.,{{(((,....((((((,(((....}))}))))))....}}}....................................................................,((({{(..{{({,,,,|||}..}}}))))|||{.....,}}...},},.)}}},))))))).))))))).....)).)))))))))((......))
Forensic Context

No forensic context available.