Basic Information
Symbol
hsa_PDS5B_0002200
RNA Class
transcript (circRNA)
Alias
hsa_circ_0100276
hsa_circPDS5B_003
hsa-PDS5B_0163
Host gene
PDS5B
Type of circRNA
Intron-Exon-Intron
Location (GRCh37)
13:33208202-33284243
UCSC (hg19)
Location (GRCh38)
13:32634065-32710106
UCSC (hg38)
Secondary Structure
Generated by RNAfold
Minimum free energy (MFE) structure:
Secondary structure that contributes a minimum of free energy.
Secondary structure that contributes a minimum of free energy.
Ensemble properties:
Thermodynamic properties of the Boltzmann ensemble.
Thermodynamic properties of the Boltzmann ensemble.
Minimum free energy
-39.90 kcal/mol
Thermodynamic ensemble
Free Energy:
-43.99 kcal/mol
Frequency:
0.0013
Diversity:
51.98
MFE Structure Visualization
Structure Prediction
MFE Structure Prediction
((.(((((.(((((((((.(((((...((.....))...)))))...(((.((((....(((..((..(((.....)))..))..)))....)))).)))...................................................((((((......))))))(((((((((.((((...))))))).....)))))).....)))))))))....))))).))(((((..........)))))
Thermodynamic Ensemble Prediction
((.(((((,(((({((({.{{{{,..}||.}},.,},,,||||}...,,,.{{{,..,,|||,.((,{({({{,,.,,|,.}}..}}}....}}},.}},...................................................((((((......)))))){(((((,(({((((...)))),,),,...))))))..,,,)))))))))....,)))).))(((((..........)))))
Forensic Context
No forensic context available.