Basic Information
Symbol
hsa_PDS5B_0003600
RNA Class
transcript (circRNA)
Alias
hsa_circ_0029940
hsa_circPDS5B_004
hsa-PDS5B_0017
Host gene
PDS5B
Type of circRNA
Exon-Exon
Location (GRCh37)
13:33222891-33226144
UCSC (hg19)
Location (GRCh38)
13:32648754-32652007
UCSC (hg38)
Secondary Structure
Generated by RNAfold
Minimum free energy (MFE) structure:
Secondary structure that contributes a minimum of free energy.
Secondary structure that contributes a minimum of free energy.
Ensemble properties:
Thermodynamic properties of the Boltzmann ensemble.
Thermodynamic properties of the Boltzmann ensemble.
Minimum free energy
-73.40 kcal/mol
Thermodynamic ensemble
Free Energy:
-81.83 kcal/mol
Frequency:
0.0000
Diversity:
83.63
MFE Structure Visualization
Structure Prediction
MFE Structure Prediction
(((....(((.((((((((((((.((.............)))).)))))))))).)))..(((((.((..(((((..(((...((((((.((((((((((.....((.((((.(((((..........(((((.......(......)......)))))....(((((((((((...((((((............))))))...)))).)))))))......)))))..)))))).....)))))))...))))))))).)))...))))))).)))))((((((((.......))))))))............)))((..........))
Thermodynamic Ensemble Prediction
(((..,.{((.((((((((((((,({..,,...,,...}),)),,))))))))).))}..,{(((,{{..{({{{.,(((...((((((.{{,{((((((.....((.({{(.((((({{{,,,....|{||||,.....,..,..{|{.....,,))},{{.(((((((((((...((((((............))))))...)))).))))))).},},.))))),.)))))).....)))))))...}}}))||||,}}}.}})))}.)).)))))|(((((((.......))))))),.,,,,,......)))((..........))
Forensic Context
No forensic context available.