Basic Information
Symbol
hsa_PDS5B_0006600
RNA Class
transcript (circRNA)
Alias
hsa_circ_0029944
hsa_circPDS5B_012
hsa-PDS5B_0058
Host gene
PDS5B
Type of circRNA
Exon-Exon
Location (GRCh37)
13:33232376-33233417
UCSC (hg19)
Location (GRCh38)
13:32658239-32659280
UCSC (hg38)
Secondary Structure
Generated by RNAfold
Minimum free energy (MFE) structure:
Secondary structure that contributes a minimum of free energy.
Secondary structure that contributes a minimum of free energy.
Ensemble properties:
Thermodynamic properties of the Boltzmann ensemble.
Thermodynamic properties of the Boltzmann ensemble.
Minimum free energy
-63.20 kcal/mol
Thermodynamic ensemble
Free Energy:
-69.18 kcal/mol
Frequency:
0.0001
Diversity:
47.83
MFE Structure Visualization
Structure Prediction
MFE Structure Prediction
(.........((((((((((......((((((((((((...(....)....))))).)..)))))).((((........))))((((((((((((((((.(((((.(((((...))))).))))).)))......)))))))...))))))..........................)))))))))).((....))..........((((......))))....)(((((((((..((((((((....))))))))..(((((.((((....)))))))))(((.((((.....)))).))).)))))))))
Thermodynamic Ensemble Prediction
(.........((((((((((......((((({{(((((...{....)....))))).)..}))))){((({....,,..}}}}|(((((((((((((((.(((((.(((((...))))).))))).)))......)))))))...)))))}....,.......|,|.,.....,,,.)))))))))),{{{.............,.||||..,...,}))},..)(((((((((..((((((((....))))))))..(((((.((({....}))))))))(((.((((.....)))).))).)))))))))
Forensic Context
No forensic context available.