Basic Information
Symbol
hsa_PDS5B_0010300
RNA Class
transcript (circRNA)
Alias
hsa_circ_0029948
hsa_circPDS5B_024
Host gene
PDS5B
Type of circRNA
Exon-Exon
Location (GRCh37)
13:33247353-33344899
UCSC (hg19)
Location (GRCh38)
13:32673216-32770761
UCSC (hg38)
Secondary Structure
Generated by RNAfold
Minimum free energy (MFE) structure:
Secondary structure that contributes a minimum of free energy.
Secondary structure that contributes a minimum of free energy.
Ensemble properties:
Thermodynamic properties of the Boltzmann ensemble.
Thermodynamic properties of the Boltzmann ensemble.
Minimum free energy
-27.00 kcal/mol
Thermodynamic ensemble
Free Energy:
-31.08 kcal/mol
Frequency:
0.0013
Diversity:
37.67
MFE Structure Visualization
Structure Prediction
MFE Structure Prediction
((((((.....((((.(((((..(((........(((((((....((((.(((((...(((.............))))))))))))..)))))))........................................................((((...(((.(((..((((........))))...)))...))).)))).((((....)).)).......)))....))))).))))))))))(....)
Thermodynamic Ensemble Prediction
{(((((.....((((.(((((..(((,.......(((((((....((((.(((((...(({..,,.........})})))))))))..)))))))........................................................((((...{{{.(((..{{((........)}}},,.},,...}},.)))).{{((....)).}}.......)))....))))).)))),,}}))}},...
Forensic Context
No forensic context available.