Basic Information
Symbol
hsa_PDS5B_0022700
RNA Class
transcript (circRNA)
Alias
hsa_circ_0029961
hsa_circPDS5B_055
hsa-PDS5B_0016
Host gene
PDS5B
Type of circRNA
Exon-Exon
Location (GRCh37)
13:33306238-33320238
UCSC (hg19)
Location (GRCh38)
13:32732101-32746100
UCSC (hg38)
Secondary Structure
Generated by RNAfold
Minimum free energy (MFE) structure:
Secondary structure that contributes a minimum of free energy.
Secondary structure that contributes a minimum of free energy.
Ensemble properties:
Thermodynamic properties of the Boltzmann ensemble.
Thermodynamic properties of the Boltzmann ensemble.
Minimum free energy
-127.80 kcal/mol
Thermodynamic ensemble
Free Energy:
-140.80 kcal/mol
Frequency:
0.0000
Diversity:
218.11
MFE Structure Visualization
Structure Prediction
MFE Structure Prediction
((......((((((.(((((.................((......)).(((..((((.((.((((((.((((((....))))))..(((((.....))))).((((.((((...(((.....((.((((.....)))).))..)))...)))).))))..(((((...(((.(((((((((...((((((((...(((.......)))..)))))))).................(((((((.((((..(((((...)))))(((((((....))).)))))))).))))))).......))))))....))))))..)))))..(((.((((.((((((((....))).....)))))..........)))).))))))))))).))))..)))............))))).)))))).......))...(((.(((((..(((((((((..(((((.(((.((.((.(..((((((((..............(((((.......)))))...((((.((((((...(((....)))...))))))))))..))))))).)..).)).)).))))))))...))))))......)))...))))).)))...
Thermodynamic Ensemble Prediction
(({...,,{(((({,(((({..........},,,..,||}..,{||,{((({({{{.....{((({{((((({....,,({(((((({{,(,{{,,.||{{.((((.((((...(({..,,{{(.{(((.....))))}}},,)))...)))).))))..,,|||,..,{{.{({..({{{...((((((((...(((.......)))..))))))))..,.,,...,,,,....(((((((.((((..,{(((,,,|||},{{,,{||.,},))),)),,)))).)))))))..,,}.....,.,.}|,})))}}..}}}}}.{{{{{|,,,{{{{{{,|{,|{{|||.....{{.|{(((((,...}))))))}.)))))))}.}}}}..|,,.......,....))},,,))))))}}}}}..,,...{,|}||||,..,.|||||||}}|||||||||.,.}}|}}}.,{{{{|||,.....,,{{,..{((({(....,..}}}}}.},|||}}||||||}},||||,.{|||,,{||||||||||..}}}||||...,{{...,},)}}),,,,.,.}},,,}..,},.}}))}.,)))),.))...
Forensic Context
No forensic context available.