Basic Information
Symbol
hsa_PDS5B_0029000
RNA Class
transcript (circRNA)
Alias
hsa_circ_0100311
hsa_circPDS5B_069
hsa-PDS5B_0041
Host gene
PDS5B
Type of circRNA
Exon-Exon
Location (GRCh37)
13:33344259-33347462
UCSC (hg19)
Location (GRCh38)
13:32770121-32773324
UCSC (hg38)
Secondary Structure
Generated by RNAfold
Minimum free energy (MFE) structure:
Secondary structure that contributes a minimum of free energy.
Secondary structure that contributes a minimum of free energy.
Ensemble properties:
Thermodynamic properties of the Boltzmann ensemble.
Thermodynamic properties of the Boltzmann ensemble.
Minimum free energy
-147.90 kcal/mol
Thermodynamic ensemble
Free Energy:
-160.14 kcal/mol
Frequency:
0.0000
Diversity:
120.57
MFE Structure Visualization
Structure Prediction
MFE Structure Prediction
.(((..((((((..(((....))).............((.((........)).))........(((.((((((.((((((((...)))).))))........(((..((((.....((...((((((...((((((....))))))....)))))).....))....)))).)))......(((((........................(((..........))).(((.......))).......(((..(((((((......))))))).)))............)))))...........(((((......)))))..........(((...(((((..(......)..)))))....)))...........(((((.....(((.......)))...........((((..((..(((.(((((.....((.....))....))))))))..)).)))).......)))))...((((............))))((((....)).))..............)))).)))))..........((((.....)))).))))))......(((((((...((((.....((.(.(.....).).))....))))..))))))).((((((.((......)).))))))((((((.............)))))).))).....
Thermodynamic Ensemble Prediction
,(((..,(((((..(((....|||.{........,,}||{(({..{.,{{||{{|........(((,((({((.((((((({...}))).))))........(((..((((...,.((...((((((...((((((....))))))....)))))).....)).,..)))).)))......(((((............,,......,....,,..........}}|.{((......,)}}......,(((..(((((({......))))))).))).,.,,.......)))))...........(((((......)))))..........{{{...(((((..(......)..)))))....,,,...........(((((.....(({.{....})))...........((((..((..((,{(((((...,.((.....)).,..))))))))..)).))))...,,..)))))...((((............)))){{((....)).}}.......,,,}.,,)))}.,,}))..........((((.....)))){||}},....,|}(((((((...((({....,((...,.....}.}.)},.,.))))..))))))))||||||},,}}},..))|}}}))}{,,,{{...,,,,......,))))).)})....,
Forensic Context
No forensic context available.