Basic Information
Symbol
hsa_chr13_0121900
RNA Class
transcript (circRNA)
Alias
hsa-PDS5B_0243
Host gene
PDS5B
Type of circRNA
Intergenic-Intergenic
Location (GRCh37)
13:33309339-33320166
UCSC (hg19)
Location (GRCh38)
13:32735202-32746028
UCSC (hg38)
External Database
Secondary Structure
Generated by RNAfold
Minimum free energy (MFE) structure:
Secondary structure that contributes a minimum of free energy.
Secondary structure that contributes a minimum of free energy.
Ensemble properties:
Thermodynamic properties of the Boltzmann ensemble.
Thermodynamic properties of the Boltzmann ensemble.
Minimum free energy
-68.40 kcal/mol
Thermodynamic ensemble
Free Energy:
-78.11 kcal/mol
Frequency:
0.0000
Diversity:
80.75
MFE Structure Visualization
Structure Prediction
MFE Structure Prediction
((................))(.....((((((....((((((...(((((.((((...............((((..(((((.(((((...((((.((((((((...((((((..(((((..((((..((((((((((((.......))))....)))))..)))))))..........(((((.(((((((((.......((.((((.((.......)).))))))...))))))))))))))..(((((.(..(((........)))..).))))).((((((...))))))...))))).)))))).......))))))))))))....)))).).)))))......))))...)))))))))...))))))))))))......)
Thermodynamic Ensemble Prediction
((........,,......}){,{,..(((((,...,((((((...((({{{((((.........,({,.,((,,..(((((.,((((...((((.((((((((...((((((..(((((..((((..({{(((((((((.......))))....)))))..}}}))))..........{{{{,{(((((((((......,({,{((({((....}}})).}})))}...))))))))))}}}}{{(((({..{{(((,..{{{{.|||..,.))))))|||||,...,)))))...))))).)))))).......))))))))))))....)))).,.))))),,,.,,,)),.,.)))))))))...)))))))))))),,....)
Forensic Context
No forensic context available.