Basic Information
Symbol
hsa_PDS5B_0028700
RNA Class
transcript (circRNA)
Alias
hsa-PDS5B_0296
Host gene
PDS5B
Type of circRNA
Exon-Exon
Location (GRCh37)
13:33338627-33344698
UCSC (hg19)
Location (GRCh38)
13:32764489-32770560
UCSC (hg38)
External Database
Secondary Structure
Generated by RNAfold
Minimum free energy (MFE) structure:
Secondary structure that contributes a minimum of free energy.
Secondary structure that contributes a minimum of free energy.
Ensemble properties:
Thermodynamic properties of the Boltzmann ensemble.
Thermodynamic properties of the Boltzmann ensemble.
Minimum free energy
-111.90 kcal/mol
Thermodynamic ensemble
Free Energy:
-122.10 kcal/mol
Frequency:
0.0000
Diversity:
108.75
MFE Structure Visualization
Structure Prediction
MFE Structure Prediction
((((..((((((......(((((.(.(((((..(((((((........)))))))..))))).).............((((((.(((....)))..))))))..)))))))))))...))))((...(((.(........))))((((.((..((..((.......))..)).)))))).((((((....(((((.............(((..((((.....((...((((((...((((((....))))))....)))))).....))....)))).)))......(((((........................(((..........))).(((.......))).......(((..(((((((......))))))).)))............)))))...........(((((......)))))..........(((...(((((..(......)..)))))....)))............((((....(......)...))))...((.....)))))))..))))))....((...))..))
Thermodynamic Ensemble Prediction
((((..{{(((({{...,({,{(.,.{{{{,..(((((((........))))))),,|}}}}.}},,..........(((((({((,...})))..))))))..|||||},,}}}..,},}){|...{({.{........}}))|||{.||,,||..,,.,.....||.,||.||,,|,.((((((....(((((..,,,..,.....(((..((((...,.((...((((((...((((((....))))))....)))))).....))....)))).}))......(((((............,,......,....,,..........}}|.{((......,)}}......,(((..(((((({......))))))).))).,.,,.......)))))...........(((((......)))))..........{{{...(((((..(......)..)))))....,,,...........{((....},}{{,.,....,)))....((.....))))))).}))))))..,.,},..,)..}}
Forensic Context
No forensic context available.