ForensicRNA
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Index
hsa_chr1_0162300
Basic Information
Symbol
hsa_chr1_0162300
RNA Class
transcript (circRNA)
Alias
hsa-PIP5K1A_0057
Host gene
PIP5K1A
Type of circRNA
Intergenic-Intergenic
Location (GRCh37)
1:151192928-151193173
UCSC (hg19)
Location (GRCh38)
1:151220452-151220697
UCSC (hg38)
External Database
circbank
Secondary Structure
Generated by RNAfold
Minimum free energy (MFE) structure:
Secondary structure that contributes a minimum of free energy.
Ensemble properties:
Thermodynamic properties of the Boltzmann ensemble.
Minimum free energy
-67.80
kcal/mol
Thermodynamic ensemble
Free Energy:
-71.94
kcal/mol
Frequency:
0.0012
Diversity:
48.60
MFE Structure Visualization
Structure Prediction
MFE Structure Prediction
COPY
((((((.((((...((((.(((((((...((((.(....)))))..(..((((...........))))..)))))))))))))))).))))..))((((.(((((((..(((((((((((((...(((.((...((((((.((.((.((((.(((....))).))))((......)).)).)).)))))).....)).)))..)))))))))...........))))......))))))).))).)
Thermodynamic Ensemble Prediction
COPY
({((((.((((...((({,(((((((...((((.(....}))))..,..{({{...........})))..}))))))))))))))).))))..})((((.(((((((..{((((((((((((...(((.((...((((((.((..({(({{{(,(....},}..}},||,,,.,,)).))})).)))))).....)).)))..)))))))))...........})}).,....))))))).))).)
Forensic Context
No forensic context available.