Basic Information
Symbol
hsa_PRDM5_0003000
RNA Class
transcript (circRNA)
Alias
hsa-PRDM5_0113
Host gene
PRDM5
Type of circRNA
Exon-Exon
Location (GRCh37)
4:121652773-121706246
UCSC (hg19)
Location (GRCh38)
4:120731618-120785091
UCSC (hg38)
External Database
Secondary Structure
Generated by RNAfold
Minimum free energy (MFE) structure:
Secondary structure that contributes a minimum of free energy.
Secondary structure that contributes a minimum of free energy.
Ensemble properties:
Thermodynamic properties of the Boltzmann ensemble.
Thermodynamic properties of the Boltzmann ensemble.
Minimum free energy
-154.80 kcal/mol
Thermodynamic ensemble
Free Energy:
-166.64 kcal/mol
Frequency:
0.0000
Diversity:
199.00
MFE Structure Visualization
Structure Prediction
MFE Structure Prediction
((((.((((....))))..........(((((.((((((...((..(.(((.((...(((((...(((((.(((...(((...........((((((((.(((((((..((((..((((((((((((.(((((((.....))))).)))))).....((((((.((....))..)))))).(((.....((((((((((((((.....((......)).....))))))))...))))))....))).........................((.(((..((((.((((...)))).))))..))).)).)))))))).)))).)))))))......((((((((....))).)).)))...........)))))))).....))).))).)))))...))))).))))).).))))))))....)))))...))))(((((((((..(((.(.((((..(((((.((((.(((......(((((.((((........)))).)))))))).))))..)))))((((.......))))........(((((((..(((...)))..)))))))..............))))).))).))))).))).)
Thermodynamic Ensemble Prediction
((,,.((((,...|||}...|}((({{{(((,,.,({({..,||{||.||||||,..,,.{|||||||.||||}.((((((......(((..((((((..(.(((....))).)..))))))..||},{.((((,..,}}),))|,,{|||...}})},,,||.,)))))),.}).}}...{{{.....{{{{{{{((((((({...,((,,,,,,}}..,,,)))))}||,,,||}|||....}}}.,,,}............||||||,,}|,{....((((.((((...}))).)))}....,(((({.{{|||||,,,||.{{{|||{{{|},((((((,{....|||,|}{|||,{((((..,{,,((((({..........,.)))))}...))))))))}|||}.,{,...,,,),.))))),},.))))|||,|||||}}||,.|.||{,..,||||}||||}||{......(((((.((((.,....}.)))).)))))}}}.,}}|,,|||||((((.......)))).,,.,}}},||||{,..,,|}},))),.}||||||...........}}}))))),),,.))))})))).)
Forensic Context
No forensic context available.