Basic Information
Symbol
hsa_PRDM5_0008200
RNA Class
transcript (circRNA)
Alias
hsa-PRDM5_0072
Host gene
PRDM5
Type of circRNA
Intron-Exon-Intron
Location (GRCh37)
4:121719422-121781764
UCSC (hg19)
Location (GRCh38)
4:120798267-120860609
UCSC (hg38)
External Database
Secondary Structure
Generated by RNAfold
Minimum free energy (MFE) structure:
Secondary structure that contributes a minimum of free energy.
Secondary structure that contributes a minimum of free energy.
Ensemble properties:
Thermodynamic properties of the Boltzmann ensemble.
Thermodynamic properties of the Boltzmann ensemble.
Minimum free energy
-54.10 kcal/mol
Thermodynamic ensemble
Free Energy:
-61.96 kcal/mol
Frequency:
0.0000
Diversity:
80.38
MFE Structure Visualization
Structure Prediction
MFE Structure Prediction
(....)(((((......))).(((((((.(((.((........(((((....)))))...)).)))..)))))))....(((((.((((((((((..((((.......((((((.((((....))))((((....))))......))))))...((((((((..((....(((.(((....(((.((((((((...)))))))).))).))).))).)).)))))))).(((((((((....((.....(((......))).....))...)))))))))...(((.....))))))))))))))).)).)))))......))
Thermodynamic Ensemble Prediction
(....)((.,,......|||.(((((((.{((.({........(((({,,..,||,,...)).})),.))))))}....{((((.((({(({{{{...|,|}}.},}},|{{{{.{,,.....}}}}((((....))))......||,}}|||,((((((((..{{....{({.(({....{((.((((((({...}))))))).))},))),))}.}}.)))))))).{((((((((....,,.....(((......))).....}}...)))))))))...(((.....))),||.,,})))}}.}}.))))),,....})
Forensic Context
No forensic context available.