Basic Information
Symbol
hsa_PRDM5_0011200
RNA Class
transcript (circRNA)
Alias
hsa-PRDM5_0106
Host gene
PRDM5
Type of circRNA
Intron-Exon-Intron
Location (GRCh37)
4:121828077-121834540
UCSC (hg19)
Location (GRCh38)
4:120906922-120913385
UCSC (hg38)
External Database
Secondary Structure
Generated by RNAfold
Minimum free energy (MFE) structure:
Secondary structure that contributes a minimum of free energy.
Secondary structure that contributes a minimum of free energy.
Ensemble properties:
Thermodynamic properties of the Boltzmann ensemble.
Thermodynamic properties of the Boltzmann ensemble.
Minimum free energy
-42.80 kcal/mol
Thermodynamic ensemble
Free Energy:
-48.21 kcal/mol
Frequency:
0.0002
Diversity:
53.47
MFE Structure Visualization
Structure Prediction
MFE Structure Prediction
((((....(((((.......(((((((..(((((((.....)))))))..)))))))...((((..(.(((((.(.(((....))).)))))))..))))......................................................((((((((......)))))))).((((((((.((........)).))))))))........))))).....)))).((((((((....))))))))
Thermodynamic Ensemble Prediction
((((,{..(((((....{..(((((((,,(((((((.....})))))}..}}})))),,|(({{..|,|||{(,{.{{{,.,,))).,)))))},,))))......................................................,{((((({,.....)))))))}.((((((((.((........)).))))))))........))))).,}..)))).((((((({....})))))))
Forensic Context
No forensic context available.