Basic Information

Symbol
hsa_PTK2_0001700
RNA Class
transcript (circRNA)
Alias
hsa_circ_0085729 hsa_circPTK2_120 hsa-PTK2_0134
Host gene
PTK2
Type of circRNA
Exon-Exon
Location (GRCh37)
8:141678368-141684503 UCSC (hg19)
Location (GRCh38)
8:140668269-140674404 UCSC (hg38)
External Database
circbank circBase

Secondary Structure

Generated by RNAfold
Minimum free energy (MFE) structure:
Secondary structure that contributes a minimum of free energy.
Ensemble properties:
Thermodynamic properties of the Boltzmann ensemble.
Minimum free energy
-76.40 kcal/mol
Thermodynamic ensemble
Free Energy: -81.81 kcal/mol
Frequency: 0.0002
Diversity: 65.23
MFE Structure Visualization
Structure Prediction
MFE Structure Prediction
........((((((.....((.......))....))))))((((((....))))))...((((..(((.((((((....))))))..)))....))))(((...(((((.....)))))..)))(((((....(((...........)))....)))))(((.(((....)))..))).(((......)))..((((((((.....((((.(((....)))..)))).....))))...))))(((((.(((........))).)))))...
Thermodynamic Ensemble Prediction
.......,((((((.....({.......)}....))))))|(((((....)))))}.,{{(((..(((.((((((....))))))..)))....,|}||{{,..,,,((.{{{.|||,,..)))|||||....{{|,....,,,...|}},,..}}}))(({.{((....)})..))),{{{,.....}},.,(((((((({....((((.(((....)))..)))).....)}}),,,))))(((((.{((.......,))).)))))...
Forensic Context

No forensic context available.