Forensic RNA Knowledge Base

Basic Information

Symbol

hsa_PTK2_0040200

RNA Class

transcript (circRNA)

Alias

hsa-PTK2_0374

Host gene

PTK2

Type of circRNA

Intron-Intron

Location (GRCh37)

8:141840151-141840292 UCSC (hg19)

Location (GRCh38)

8:140830052-140830193 UCSC (hg38)

External Database

Generated by RNAfold

Minimum free energy (MFE) structure:
Secondary structure that contributes a minimum of free energy.

Ensemble properties:
Thermodynamic properties of the Boltzmann ensemble.

Minimum free energy

-20.40 kcal/mol

Thermodynamic ensemble

Free Energy: -23.35 kcal/mol

Frequency: 0.0083

Diversity: 43.07

MFE Structure Visualization

MFE Structure Prediction

.....((((.((....((((....(((((((.(.........(((((((...........(((((......)))))..))))))).......).)))))))..))))....)).)))).((((((....)))))).......

Thermodynamic Ensemble Prediction

.....((((.((....((((....(((((((.{.........(((((((...........{((((,,,...))))),,))))))).,.}.,.}.)}))))),}})))},,,)).}})).((((((....)))))).......