Basic Information
Symbol
hsa_PVT1_0004200
RNA Class
transcript (circRNA)
Alias
hsa_circ_0085550
hsa_circPVT1_015
Host gene
PVT1
Type of circRNA
Exon-Exon
Location (GRCh37)
8:128996150-129001537
UCSC (hg19)
Location (GRCh38)
8:127983904-127989291
UCSC (hg38)
Secondary Structure
Generated by RNAfold
Minimum free energy (MFE) structure:
Secondary structure that contributes a minimum of free energy.
Secondary structure that contributes a minimum of free energy.
Ensemble properties:
Thermodynamic properties of the Boltzmann ensemble.
Thermodynamic properties of the Boltzmann ensemble.
Minimum free energy
-127.40 kcal/mol
Thermodynamic ensemble
Free Energy:
-135.86 kcal/mol
Frequency:
0.0000
Diversity:
146.24
MFE Structure Visualization
Structure Prediction
MFE Structure Prediction
(((((((....(((.(((((.((..((...((((.(..((((((((((..................((((((....(((((.(((..((((((((..(....)..))))........(((....)))....((((((((((((((((............))))).((......))...)))))))))))((((..........))))....(((((((...(((.(((......))).)))...)))))))))))))).)))))...))))))..((((((..((....)).))))))(((....)))....))))))))))..).))))......((((((............))))))(((...((((((.........))))))....)))..))..))))))).)))..)))))))...........
Thermodynamic Ensemble Prediction
(,((((,{.{{((({((((((((({{{,..,((({(,.((,,,{{((({{{{,.{{{{{.......,,||||,,.,|||||}{||.|{|{{((((..(....}..))))|.....,,{{{.,,.)))|...{((((((((({{{{{{.{{{,...}}},})}}),{{.....,))...})))))))))}((((..,....,..))))...,(((({{{..,|||,||||,,..,))).)))..,)))))))))),)))}})|,|{{.,,,)))..((((((..((....)).)))))){,(,,,{|||....,}})))))))}.}.,}}|{{{{{{((,({{.,{{{{.....{|||,}|(((...((((((.........))))))....))).,..,,)),,})}))))}}),)))))}}},......}
Forensic Context
No forensic context available.