Basic Information
Symbol
hsa_PVT1_0005300
RNA Class
transcript (circRNA)
Alias
hsa_circ_0135717
hsa_circTCONS_00015357_001
hsa-PVT1_0002
Host gene
PVT1
Type of circRNA
Intron-Exon-Intron
Location (GRCh37)
8:129001408-129022690
UCSC (hg19)
Location (GRCh38)
8:127989162-128010444
UCSC (hg38)
Secondary Structure
Generated by RNAfold
Minimum free energy (MFE) structure:
Secondary structure that contributes a minimum of free energy.
Secondary structure that contributes a minimum of free energy.
Ensemble properties:
Thermodynamic properties of the Boltzmann ensemble.
Thermodynamic properties of the Boltzmann ensemble.
Minimum free energy
-31.50 kcal/mol
Thermodynamic ensemble
Free Energy:
-36.28 kcal/mol
Frequency:
0.0004
Diversity:
45.39
MFE Structure Visualization
Structure Prediction
MFE Structure Prediction
((..((((((((.((((((................((((((............))))))(((...((((((.........))))))....)))............................................................)))).))...)))))))).((......))..........))(((((((...((((((....))))))..((.(((.....)))..))...)))))))
Thermodynamic Ensemble Prediction
((..((((((((.{(((((...,,...........((((({.........,..})))))(((...((((((.........))))))....)))............................................................))))}.)...)))))))).({......},......,,..})(((((((,,.{{((({....,}}}}}..{{,{{(.....)))..))},.)))))))
Forensic Context
No forensic context available.