Basic Information
Symbol
hsa_PVT1_0006400
RNA Class
transcript (circRNA)
Alias
hsa_circ_0008147
hsa_circPVT1_021
hsa-PVT1_0010
Host gene
PVT1
Type of circRNA
Intron-Exon-Intron
Location (GRCh37)
8:129021836-129032965
UCSC (hg19)
Location (GRCh38)
8:128009590-128020719
UCSC (hg38)
Secondary Structure
Generated by RNAfold
Minimum free energy (MFE) structure:
Secondary structure that contributes a minimum of free energy.
Secondary structure that contributes a minimum of free energy.
Ensemble properties:
Thermodynamic properties of the Boltzmann ensemble.
Thermodynamic properties of the Boltzmann ensemble.
Minimum free energy
-39.70 kcal/mol
Thermodynamic ensemble
Free Energy:
-43.96 kcal/mol
Frequency:
0.0010
Diversity:
48.36
MFE Structure Visualization
Structure Prediction
MFE Structure Prediction
(((((((.(((((((..((......))..))))))).)...((((...................)))))))).))(((((((.....(((..((((((....................................................(((((((......)))..))))..((((..((((......)))).))))(((.((....)).))).........))))))..)))......))))))..)
Thermodynamic Ensemble Prediction
(((((((,({{((((,,,,......)),,))}}))),}...((({,,................,)))))))).))(((((((.....(((..((((((....................................................((({(({......))).|}))).,(({(..{(((......})}}.}})){{(.((....)).))).........))))))..)))......)))))),.)
Forensic Context
No forensic context available.