Basic Information
Symbol
hsa_PVT1_0008700
RNA Class
transcript (circRNA)
Alias
hsa_circ_0085559
hsa_circPVT1_026
Host gene
PVT1
Type of circRNA
Exon-Exon
Location (GRCh37)
8:129113226-129113499
UCSC (hg19)
Location (GRCh38)
8:128100980-128101253
UCSC (hg38)
Secondary Structure
Generated by RNAfold
Minimum free energy (MFE) structure:
Secondary structure that contributes a minimum of free energy.
Secondary structure that contributes a minimum of free energy.
Ensemble properties:
Thermodynamic properties of the Boltzmann ensemble.
Thermodynamic properties of the Boltzmann ensemble.
Minimum free energy
-36.50 kcal/mol
Thermodynamic ensemble
Free Energy:
-42.46 kcal/mol
Frequency:
0.0001
Diversity:
72.51
MFE Structure Visualization
Structure Prediction
MFE Structure Prediction
((((.((((...((((....((((((.(((....)))..)))))).......)))).))))............((.((((((........................((((............))))..(((....)))..)))))).))...............))))((.....((((((.........................(((((((....)).)))))...((((.(((.......))).))))............))))))...))
Thermodynamic Ensemble Prediction
({,,.,(((..,((((....((((({.(((....)))..}))))).,.....}}}},||},,,{.,{.,....||.((((((.,............{{,...,}}.{(((............))))..,{,...,))}..))))}}.................{{||,,,..,,,|,,,,............,},},,.,},,...(((((((....})}}))))...((((.(((,......))).))))........,...,,,,,,...,}
Forensic Context
No forensic context available.