Basic Information
Symbol
hsa_PVT1_0000400
RNA Class
transcript (circRNA)
Alias
hsa-PVT1_0047
Host gene
PVT1
Type of circRNA
Intron-Exon
Location (GRCh37)
8:128808140-128951922
UCSC (hg19)
Location (GRCh38)
8:127795894-127939676
UCSC (hg38)
External Database
Secondary Structure
Generated by RNAfold
Minimum free energy (MFE) structure:
Secondary structure that contributes a minimum of free energy.
Secondary structure that contributes a minimum of free energy.
Ensemble properties:
Thermodynamic properties of the Boltzmann ensemble.
Thermodynamic properties of the Boltzmann ensemble.
Minimum free energy
-46.43 kcal/mol
Thermodynamic ensemble
Free Energy:
-50.87 kcal/mol
Frequency:
0.0007
Diversity:
46.10
MFE Structure Visualization
Structure Prediction
MFE Structure Prediction
(((((....((((......)))).((((..(((..............)))..)))).(.(((.(((....))).))).).((((((((((....(((........................................................)))..))))))))))))))).(((((.....(((((((.......))))))).((((((((((..............))))))))))....))))).
Thermodynamic Ensemble Prediction
(((((....((((......})))|((((..(((..............)))..)))).{|{|{,({{....))).}))}..{(((((((({....(({........................................................}}).,))))))))))))))).(((((.....(((((((.......))))))).(((((((({(,.........}...))))))))))....))))).
Forensic Context
No forensic context available.