Basic Information
Symbol
hsa_PVT1_0000900
RNA Class
transcript (circRNA)
Alias
hsa-PVT1_0042
Host gene
PVT1
Type of circRNA
Intron-Intron
Location (GRCh37)
8:128850881-128851098
UCSC (hg19)
Location (GRCh38)
8:127838635-127838852
UCSC (hg38)
External Database
Secondary Structure
Generated by RNAfold
Minimum free energy (MFE) structure:
Secondary structure that contributes a minimum of free energy.
Secondary structure that contributes a minimum of free energy.
Ensemble properties:
Thermodynamic properties of the Boltzmann ensemble.
Thermodynamic properties of the Boltzmann ensemble.
Minimum free energy
-51.40 kcal/mol
Thermodynamic ensemble
Free Energy:
-55.38 kcal/mol
Frequency:
0.0016
Diversity:
59.72
MFE Structure Visualization
Structure Prediction
MFE Structure Prediction
(((((((....(((((((.(((((((.((..(((((.......(((((((.((((((.......)))))).))((((((.(((((((((((((......))).)))))))))).))))))..))))).......)))))..))...)))))..)).)))))))....))))....................(((((....))))))))(((....)))
Thermodynamic Ensemble Prediction
(((((((.,.,(((({((,,,{,{{|.||}}|||||,,},,..((({,,,.|||(((,{,..{,|}}}||,||((((((.(((((((((((((......)))})))))))))).)))))){{|||||,......))),)}}))...})))),.)),)))))))....}}}}..,{.,,,.....},.....(((((....))))))||((,...,)))
Forensic Context
No forensic context available.