Basic Information
Symbol
hsa_PVT1_0001000
RNA Class
transcript (circRNA)
Alias
hsa-PVT1_0025
Host gene
PVT1
Type of circRNA
Intron-Exon-Intron
Location (GRCh37)
8:128861504-128903244
UCSC (hg19)
Location (GRCh38)
8:127849258-127890998
UCSC (hg38)
External Database
Secondary Structure
Generated by RNAfold
Minimum free energy (MFE) structure:
Secondary structure that contributes a minimum of free energy.
Secondary structure that contributes a minimum of free energy.
Ensemble properties:
Thermodynamic properties of the Boltzmann ensemble.
Thermodynamic properties of the Boltzmann ensemble.
Minimum free energy
-53.48 kcal/mol
Thermodynamic ensemble
Free Energy:
-57.43 kcal/mol
Frequency:
0.0016
Diversity:
47.07
MFE Structure Visualization
Structure Prediction
MFE Structure Prediction
(((..(((((((((..(((((.((...........)).)))))((((((.((((..(.((...((((.......))))..)).).)))).))))))((((...........................................................))))..))))))))).(((((((((...(((..((....))..)))...((((...)))))))))))))..))).((((((...)).))))
Thermodynamic Ensemble Prediction
(((..(((((((({..{((({.{{,{.....|,..}}.})))}((((((.((((..{.((...((((.......))))..)).}.)))).)))))){({,...........................................................}}},..))))))))).(((((((((...{{{,.({....||..}}},..(({{...}))))))))))))..))}.{{{{||,,,))},)))
Forensic Context
No forensic context available.