Basic Information
Symbol
hsa_PVT1_0002100
RNA Class
transcript (circRNA)
Alias
hsa-PVT1_0044
Host gene
PVT1
Type of circRNA
Intron-Exon-Intron
Location (GRCh37)
8:128902835-128914785
UCSC (hg19)
Location (GRCh38)
8:127890589-127902539
UCSC (hg38)
External Database
Secondary Structure
Generated by RNAfold
Minimum free energy (MFE) structure:
Secondary structure that contributes a minimum of free energy.
Secondary structure that contributes a minimum of free energy.
Ensemble properties:
Thermodynamic properties of the Boltzmann ensemble.
Thermodynamic properties of the Boltzmann ensemble.
Minimum free energy
-38.10 kcal/mol
Thermodynamic ensemble
Free Energy:
-42.42 kcal/mol
Frequency:
0.0009
Diversity:
76.09
MFE Structure Visualization
Structure Prediction
MFE Structure Prediction
(((.........(((((....(((...............)))....)))))).))(((((((((((((.((((...))))..(((((((.(((..((((...............................................................))))..))).)))))))((((((..((.....))....))))))...)))))))))..((...((((........))))...))))))
Thermodynamic Ensemble Prediction
,((,,(((({{{{{{({..,|||||||.....,,,,{|,|}}....|}}}|{,||(({{{({(((((({{{{(...}}}}..({{{(((,(((..((((...............................................................))))..))).))))))),||})))},|..,..,}},}))))),,))..|{{||,({,,(({{,{{,,....,}})))))}.,.)))),
Forensic Context
No forensic context available.