ForensicRNA
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hsa_PVT1_0002300
Basic Information
Symbol
hsa_PVT1_0002300
RNA Class
transcript (circRNA)
Alias
hsa-PVT1_0018
Host gene
PVT1
Type of circRNA
Intron-Intron
Location (GRCh37)
8:128907625-128912382
UCSC (hg19)
Location (GRCh38)
8:127895379-127900136
UCSC (hg38)
External Database
circbank
Secondary Structure
Generated by RNAfold
Minimum free energy (MFE) structure:
Secondary structure that contributes a minimum of free energy.
Ensemble properties:
Thermodynamic properties of the Boltzmann ensemble.
Minimum free energy
-126.29
kcal/mol
Thermodynamic ensemble
Free Energy:
-128.49
kcal/mol
Frequency:
0.0281
Diversity:
7.75
MFE Structure Visualization
Structure Prediction
MFE Structure Prediction
COPY
(..((....))...)(((((((((((((((((((((((((.(((((((((((((((((.(((((((((.((((((...(((((((.((((((..((((((................................................................))))))...)))))).)))))))...)))))).))))))))).))))))))))))))))).)))))))))))))))))))))))))
Thermodynamic Ensemble Prediction
COPY
(..,,....,}...)(((((((((((((((((((((((((.(((((((((((((((((.(((((((((.((((((...(((((((.((((((..((((({................................................................})))))...)))))).)))))))...)))))).))))))))).))))))))))))))))).)))))))))))))))))))))))))
Forensic Context
No forensic context available.