Basic Information
Symbol
hsa_PVT1_0003400
RNA Class
transcript (circRNA)
Alias
hsa-PVT1_0019
Host gene
PVT1
Type of circRNA
Intron-Intron
Location (GRCh37)
8:128955463-128955702
UCSC (hg19)
Location (GRCh38)
8:127943217-127943456
UCSC (hg38)
External Database
Secondary Structure
Generated by RNAfold
Minimum free energy (MFE) structure:
Secondary structure that contributes a minimum of free energy.
Secondary structure that contributes a minimum of free energy.
Ensemble properties:
Thermodynamic properties of the Boltzmann ensemble.
Thermodynamic properties of the Boltzmann ensemble.
Minimum free energy
-36.80 kcal/mol
Thermodynamic ensemble
Free Energy:
-41.92 kcal/mol
Frequency:
0.0002
Diversity:
67.90
MFE Structure Visualization
Structure Prediction
MFE Structure Prediction
(.(((....)))................(((((((.........))).)))).(((........)))..............((((........((.((((....)))).)).......))))......((((((((((...........)))..)))))))......(((((((((.....)))))))))..)((.((((((((.....(((......)))......))))))))...))
Thermodynamic Ensemble Prediction
{.(((....)))...........,,...{(((({(.........))).}}}}.(((........}}},,,,,,,,{,,{,,{{({,.......||))|,,{{,{,}},}))}.,....))))......{(((((((((...........)),.}))))))},,....{{{{{{{||,,,,,))}}}}}}},.}{{.((((((((.....{({......)))......))))))))...,)
Forensic Context
No forensic context available.