Basic Information
Symbol
hsa_PVT1_0003800
RNA Class
transcript (circRNA)
Alias
hsa-PVT1_0043
Host gene
PVT1
Type of circRNA
Intron-Exon-Intron
Location (GRCh37)
8:128988469-129021964
UCSC (hg19)
Location (GRCh38)
8:127976223-128009718
UCSC (hg38)
External Database
Secondary Structure
Generated by RNAfold
Minimum free energy (MFE) structure:
Secondary structure that contributes a minimum of free energy.
Secondary structure that contributes a minimum of free energy.
Ensemble properties:
Thermodynamic properties of the Boltzmann ensemble.
Thermodynamic properties of the Boltzmann ensemble.
Minimum free energy
-45.40 kcal/mol
Thermodynamic ensemble
Free Energy:
-49.95 kcal/mol
Frequency:
0.0006
Diversity:
74.31
MFE Structure Visualization
Structure Prediction
MFE Structure Prediction
....((((.....(((((.((((((((..(((((..((.(((....)))...))..)))))..)))..)))))))))).(((((((....((((((.......................................................((...((((((...))))))...))......((((.((((...)))).)))).(((......)))((........))...)))))))))))))))))..
Thermodynamic Ensemble Prediction
.{(,((((,,,{{,(((,.,,|||,|},,,||||,.,||,(({.{,|||,..},{{|||,}.,||{{{{{{((,,,)))}||||}|}.,,(,{(({......................................................}||}.,|(({.{{{,{|.{{{{...,......((((.((((...)))).))))..........,))}}.}},}}.,))}..))))),,,))))))}))..
Forensic Context
No forensic context available.