Basic Information
Symbol
hsa_PVT1_0005900
RNA Class
transcript (circRNA)
Alias
hsa-PVT1_0022
Host gene
PVT1
Type of circRNA
Intron-Exon-Intron
Location (GRCh37)
8:129021814-129022690
UCSC (hg19)
Location (GRCh38)
8:128009568-128010444
UCSC (hg38)
External Database
Secondary Structure
Generated by RNAfold
Minimum free energy (MFE) structure:
Secondary structure that contributes a minimum of free energy.
Secondary structure that contributes a minimum of free energy.
Ensemble properties:
Thermodynamic properties of the Boltzmann ensemble.
Thermodynamic properties of the Boltzmann ensemble.
Minimum free energy
-52.20 kcal/mol
Thermodynamic ensemble
Free Energy:
-57.80 kcal/mol
Frequency:
0.0001
Diversity:
78.56
MFE Structure Visualization
Structure Prediction
MFE Structure Prediction
(............)(((((.(((((((((((..((((((........))))))..)))))..............((((.....((((.((((...)))).)))).(((......)))((........))..))))...(((.(((.((((.....))))..)))..)))....))).))).(((((.(.(.((((((((.((............(((((.............)))))............)))))))).)).).).)))))...)))))
Thermodynamic Ensemble Prediction
(............)(((((.{{,{{((((((..((((((........))))))..)))))}.....,,,.......|,.....((((.((((...)))).))))..,,.((((({{(({....,,,.|,..{{{{{,.{{{.{({.{(((.....}))).,|||,,|||...,|||.}}}.|||||.,.,.|{{{{{{{,|{.........,,.|,|||,,},}}.......||}}},.....,,}}},,,}}}})))))})}).}))),...)))))
Forensic Context
No forensic context available.