Basic Information
Symbol
hsa_PVT1_0007100
RNA Class
transcript (circRNA)
Alias
hsa-PVT1_0052
Host gene
PVT1
Type of circRNA
Intron-Intron
Location (GRCh37)
8:129027791-129028065
UCSC (hg19)
Location (GRCh38)
8:128015545-128015819
UCSC (hg38)
External Database
Secondary Structure
Generated by RNAfold
Minimum free energy (MFE) structure:
Secondary structure that contributes a minimum of free energy.
Secondary structure that contributes a minimum of free energy.
Ensemble properties:
Thermodynamic properties of the Boltzmann ensemble.
Thermodynamic properties of the Boltzmann ensemble.
Minimum free energy
-85.00 kcal/mol
Thermodynamic ensemble
Free Energy:
-88.18 kcal/mol
Frequency:
0.0058
Diversity:
23.32
MFE Structure Visualization
Structure Prediction
MFE Structure Prediction
((((.((..((.((((((..(....)..)))).)).))((((...))))..((((((((((((.......((((((........))).)))(((..((.((((((((...(((((((........)))))))))))).....))).)).)))..)))))))).))))((((((.((.........)))))))).))))).)(((((((((.((.((((((((.(((((((..................))))))))))))))).)))))))))))
Thermodynamic Ensemble Prediction
((((.((..{{.((((((..(....)..)))).)).|}((({...}))).,{(((((((((((.......((((((........))).)))(((..((.((((((((...(((((((........)))))))))))).....))).)).)))..)))))))).)))|((((((.((.........)))))))),))))},)(((((((((.((.((((((((.(((((((..................))))))))))))))).)))))))))))
Forensic Context
No forensic context available.