Basic Information
Symbol
hsa_PVT1_0008000
RNA Class
transcript (circRNA)
Alias
hsa-PVT1_0038
Host gene
PVT1
Type of circRNA
Intron-Exon
Location (GRCh37)
8:129085649-129108900
UCSC (hg19)
Location (GRCh38)
8:128073403-128096654
UCSC (hg38)
External Database
Secondary Structure
Generated by RNAfold
Minimum free energy (MFE) structure:
Secondary structure that contributes a minimum of free energy.
Secondary structure that contributes a minimum of free energy.
Ensemble properties:
Thermodynamic properties of the Boltzmann ensemble.
Thermodynamic properties of the Boltzmann ensemble.
Minimum free energy
-66.10 kcal/mol
Thermodynamic ensemble
Free Energy:
-69.45 kcal/mol
Frequency:
0.0044
Diversity:
24.58
MFE Structure Visualization
Structure Prediction
MFE Structure Prediction
((.(((((((.....)))......((((.(((((((....))).(((.((.(((....))).)).)))....))))))))))))))((....(((((......((((((((((..((.(((((....((..(.((....)))..))...)))))))..))).))))))).((.(((((.((.((((((((...)))))))).))....))))).)).)))))..))
Thermodynamic Ensemble Prediction
((.(((((((.....)))......(({(((((((((....))).(((.((.(((....))).)).)))....})))))))))))))((....(((((......((((((((((.,((.(((((....((..(.((....)))..))...))))))),.))).))))))).((.(((((.({.((((((((...)))))))).})....))))).)).)))))..))
Forensic Context
No forensic context available.