Basic Information
Symbol
hsa_PVT1_0008200
RNA Class
transcript (circRNA)
Alias
hsa-PVT1_0058
Host gene
PVT1
Type of circRNA
Intron-Exon
Location (GRCh37)
8:129102010-129108900
UCSC (hg19)
Location (GRCh38)
8:128089764-128096654
UCSC (hg38)
External Database
Secondary Structure
Generated by RNAfold
Minimum free energy (MFE) structure:
Secondary structure that contributes a minimum of free energy.
Secondary structure that contributes a minimum of free energy.
Ensemble properties:
Thermodynamic properties of the Boltzmann ensemble.
Thermodynamic properties of the Boltzmann ensemble.
Minimum free energy
-41.40 kcal/mol
Thermodynamic ensemble
Free Energy:
-46.76 kcal/mol
Frequency:
0.0002
Diversity:
70.77
MFE Structure Visualization
Structure Prediction
MFE Structure Prediction
(((..((.(((.....)))...((((..(((....(......)..)))..))))................((((.((((....)))).))))...........................................................((....))......(((((....)))))((((((.((..(((((((((.((.(........))).)))))..))))..)))))))).))..)))(...)
Thermodynamic Ensemble Prediction
(((..(({((,{{.,{{{{...{|||..||{...,{|,....}..,,},,)))}.,|,...,{{{{..,|{{{{.({((.,..|}}}.}))).,.........................................................{{....}}.||.{{(((((....))))),|||||,||.,|||.{{{|||||.(,.(((((((|...)))))))),)}.)))}})))})}..)))(...)
Forensic Context
No forensic context available.