Basic Information
Symbol
hsa_chr5_0113200
RNA Class
transcript (circRNA)
Alias
hsa-RAPGEF6_0149
Host gene
RAPGEF6
Type of circRNA
Intergenic-Intergenic
Location (GRCh37)
5:130762958-130764820
UCSC (hg19)
Location (GRCh38)
5:131427265-131429127
UCSC (hg38)
External Database
Secondary Structure
Generated by RNAfold
Minimum free energy (MFE) structure:
Secondary structure that contributes a minimum of free energy.
Secondary structure that contributes a minimum of free energy.
Ensemble properties:
Thermodynamic properties of the Boltzmann ensemble.
Thermodynamic properties of the Boltzmann ensemble.
Minimum free energy
-70.60 kcal/mol
Thermodynamic ensemble
Free Energy:
-75.83 kcal/mol
Frequency:
0.0002
Diversity:
62.56
MFE Structure Visualization
Structure Prediction
MFE Structure Prediction
((((((((((((((.....))))....((((.(((((((.....))..((((((..(((((((...))))).))..))))))........((((...))))(.(((..((((((.((.(((........)))))))))))..))).)..))))).))))))))))))).((((.(.(((((((.(((((..(((((((....................)))))))..)))))))))))).).)))))(....)
Thermodynamic Ensemble Prediction
,(((((((((((((.....))))....((((.(((((,(,....||,.((((((..(((((((...))))).))..)))))),,......((((...)))){.(((..((({({{((.(((........)))))))))))..))).)}.))))).))))))))))))),((((,{.{{{{{{{.{{{{{..((((((({,,,...,,,.,,,.,,,,.}}})))).,)))))}))))))}),)}}.,,....}
Forensic Context
No forensic context available.