Basic Information
Symbol
hsa_RAPGEF6_0003000
RNA Class
transcript (circRNA)
Alias
hsa-RAPGEF6_0202
Host gene
RAPGEF6
Type of circRNA
Intron-Exon-Intron
Location (GRCh37)
5:130769876-130788870
UCSC (hg19)
Location (GRCh38)
5:131434183-131453177
UCSC (hg38)
External Database
Secondary Structure
Generated by RNAfold
Minimum free energy (MFE) structure:
Secondary structure that contributes a minimum of free energy.
Secondary structure that contributes a minimum of free energy.
Ensemble properties:
Thermodynamic properties of the Boltzmann ensemble.
Thermodynamic properties of the Boltzmann ensemble.
Minimum free energy
-29.70 kcal/mol
Thermodynamic ensemble
Free Energy:
-33.48 kcal/mol
Frequency:
0.0022
Diversity:
58.65
MFE Structure Visualization
Structure Prediction
MFE Structure Prediction
(...((.(((((((((..((......))..))))))((((((((.(((((((((....((....))...)))))))))...)))))))).................................................................)))))...)(((((((.......(((.....................(((((.((.((((.......)))).)))))))))).......)))))))
Thermodynamic Ensemble Prediction
(...{{.|(((({(((..{(......}}..}))}}}((((((({.(((((((((,...{|....))...}}}}}))))...}))))))).{,.....,,.......................................................|}|}|,..}{{||{{{|,........................,,,..((((,.((.((((.......)))),))))))),,,,},,..,})}))))
Forensic Context
No forensic context available.