Basic Information
Symbol
hsa_chr5_0113400
RNA Class
transcript (circRNA)
Alias
hsa-RAPGEF6_0159
Host gene
RAPGEF6
Type of circRNA
Intergenic-Intergenic
Location (GRCh37)
5:130770258-130770632
UCSC (hg19)
Location (GRCh38)
5:131434565-131434939
UCSC (hg38)
External Database
Secondary Structure
Generated by RNAfold
Minimum free energy (MFE) structure:
Secondary structure that contributes a minimum of free energy.
Secondary structure that contributes a minimum of free energy.
Ensemble properties:
Thermodynamic properties of the Boltzmann ensemble.
Thermodynamic properties of the Boltzmann ensemble.
Minimum free energy
-76.10 kcal/mol
Thermodynamic ensemble
Free Energy:
-84.89 kcal/mol
Frequency:
0.0000
Diversity:
88.50
MFE Structure Visualization
Structure Prediction
MFE Structure Prediction
..(...((.....)).)..((((.((((((((..(((((((............(((((((((..............))))))))).((((((.(((((....((((.....((((.(((((.(((((((((((.(.....))))))..)))))))))))..))))....)))).)))))..))))))....)))))))(((((.........((((...))))(((((....)).)))....(((......))).(((((...........(((((.(((.......))).))))).........)))))..((((.....)))).)))))...((((((..........))))))......)))))))).))))
Thermodynamic Ensemble Prediction
..,..,((,.,|||..,.,||{|,|||(((((,{(((({{{....,,{{{{,.(((((((((..,.........,,))))))))).((((((.(((((....((((,{,,,{({{.(((((.(((((((((((.{.....})))))..)))))))))))),))))....)))).)))))..)))))).,,.|||}}}}{||||.........||||,,.|||{((((....,,,.....,,.,,|}}}}}}),,...(((......))}..{((((.(({,....)))),,}}},.......,{{{{.||..{{{{.,,.,)))}.))))}...((((((..........)))))),.....,))))))).})))
Forensic Context
No forensic context available.