Basic Information
Symbol
hsa_RAPGEF6_0009400
RNA Class
transcript (circRNA)
Alias
hsa-RAPGEF6_0229
Host gene
RAPGEF6
Type of circRNA
Exon-Exon
Location (GRCh37)
5:130791494-130791705
UCSC (hg19)
Location (GRCh38)
5:131455801-131456012
UCSC (hg38)
External Database
Secondary Structure
Generated by RNAfold
Minimum free energy (MFE) structure:
Secondary structure that contributes a minimum of free energy.
Secondary structure that contributes a minimum of free energy.
Ensemble properties:
Thermodynamic properties of the Boltzmann ensemble.
Thermodynamic properties of the Boltzmann ensemble.
Minimum free energy
-29.30 kcal/mol
Thermodynamic ensemble
Free Energy:
-33.79 kcal/mol
Frequency:
0.0007
Diversity:
62.55
MFE Structure Visualization
Structure Prediction
MFE Structure Prediction
(((..(((...(((...(((((((..((((...((((((((((.........)))))...((((......(((.(((.((((...(((((...)))))....)))).)))..))).....)))).......)))))...))))...)).)))))...))).)))..)))(((........(((((.........))))).........).))
Thermodynamic Ensemble Prediction
(((..(((...{((,..((((({,..((({|,,{(((,(((((.........)))))...,,,,,{{,....|}||{.,(({{,,(((({..,|||||,,{,||,|.,....)))}....}},},,,,,,.,)))).},))))...}}.)))})...}}).)))..)))(({.,....{.(((((.........))))).........)}))
Forensic Context
No forensic context available.