Basic Information
Symbol
hsa_RAPGEF6_0009300
RNA Class
transcript (circRNA)
Alias
hsa-RAPGEF6_0230
Host gene
RAPGEF6
Type of circRNA
Intron-Exon-Intron
Location (GRCh37)
5:130791494-130931528
UCSC (hg19)
Location (GRCh38)
5:131455801-131595835
UCSC (hg38)
External Database
Secondary Structure
Generated by RNAfold
Minimum free energy (MFE) structure:
Secondary structure that contributes a minimum of free energy.
Secondary structure that contributes a minimum of free energy.
Ensemble properties:
Thermodynamic properties of the Boltzmann ensemble.
Thermodynamic properties of the Boltzmann ensemble.
Minimum free energy
-28.80 kcal/mol
Thermodynamic ensemble
Free Energy:
-32.92 kcal/mol
Frequency:
0.0013
Diversity:
38.38
MFE Structure Visualization
Structure Prediction
MFE Structure Prediction
((..(((.(.((((.....))))).)))...(((((......)))))...........(((((((..((((((((((.((.(((((............))...................................................((((..(.((.((((...)))))).).))))..))).))..))))))))))......((((..(....)..)))).))))))).))((((.....))))
Thermodynamic Ensemble Prediction
((.{(((.(,((((.....))))},},)...{((((......)))))...........,((((((..((((((((((.((.(((((............))...................................................{(((..,.,{.(({,...})))},.}.)))}..))).))..))))))))))......{{{{..,.,..}..}})}.))))))).))((((.....))))
Forensic Context
No forensic context available.