Basic Information
Symbol
hsa_RAPGEF6_0014400
RNA Class
transcript (circRNA)
Alias
hsa-RAPGEF6_0144
Host gene
RAPGEF6
Type of circRNA
Exon-Exon
Location (GRCh37)
5:130815306-130834211
UCSC (hg19)
Location (GRCh38)
5:131479613-131498518
UCSC (hg38)
External Database
Secondary Structure
Generated by RNAfold
Minimum free energy (MFE) structure:
Secondary structure that contributes a minimum of free energy.
Secondary structure that contributes a minimum of free energy.
Ensemble properties:
Thermodynamic properties of the Boltzmann ensemble.
Thermodynamic properties of the Boltzmann ensemble.
Minimum free energy
-75.20 kcal/mol
Thermodynamic ensemble
Free Energy:
-80.93 kcal/mol
Frequency:
0.0001
Diversity:
50.76
MFE Structure Visualization
Structure Prediction
MFE Structure Prediction
..((((((((....((((((.((.((((((....(((((((....)))))))....)))))).)).))).)))))).)))))..((((((((.((((((..(((((...((((.........))))..........((((((.((((.(....(((......((((((((.(((.((.(((..((.....))..))).))))).))))))))........)))...).)))).))))))(((((...)))))..))))).)))))....).)))))))).
Thermodynamic Ensemble Prediction
..((((((((,...{(((((.((.((((((..{.(((((((....)))))))....)))))).)).))).)))))))))}))..((((((((,((((((.,(((({...((((.,{...,..}))),.}.,},,,.((((((.((((.(..,,({{......((((((((.(((.((.(((..((.....))..))).))))).)))))))).......,))}...}.)))).))))))(((((...))))),,})))),}))))....}.)))))))).
Forensic Context
No forensic context available.