Basic Information
Symbol
hsa_RAPGEF6_0019200
RNA Class
transcript (circRNA)
Alias
hsa-RAPGEF6_0123
Host gene
RAPGEF6
Type of circRNA
Exon-Exon
Location (GRCh37)
5:130840319-130928159
UCSC (hg19)
Location (GRCh38)
5:131504626-131592466
UCSC (hg38)
External Database
Secondary Structure
Generated by RNAfold
Minimum free energy (MFE) structure:
Secondary structure that contributes a minimum of free energy.
Secondary structure that contributes a minimum of free energy.
Ensemble properties:
Thermodynamic properties of the Boltzmann ensemble.
Thermodynamic properties of the Boltzmann ensemble.
Minimum free energy
-92.40 kcal/mol
Thermodynamic ensemble
Free Energy:
-99.74 kcal/mol
Frequency:
0.0000
Diversity:
98.42
MFE Structure Visualization
Structure Prediction
MFE Structure Prediction
(((...........(((((.((.((.....)).))..)))))..((((((((((((((..((((((((((((((.(((.((((((((((((((((((.((((......))))..))))))......))))(((((((.(((..((((..(((.((((((.....)))))).)))..))))..)))...)))))))))))......)))).))).......((.(((..((((((((........)))))))).))).)).))))))))).)))))..)))...((((((............(((................))).........)))))).)))))))).))))))((.((.((.((((...((......))...)))).)).)).))
Thermodynamic Ensemble Prediction
{((..,..,{{,{((({,,.,{||||...{{(,,{{{{{{||,{((((((((((((((..((((((((((((((.(((.(((((((((({(((((((.((((......))))..))))))}.....})}}(((((((,(({..{{((.(((({(,{(((....,))}})))))).}),}}..)}),,.))))))),}}}......)))).))).......((.(((..((((((((........)))))))).))),)}.))))))))),}))))..))),..{(({((,{,.........{{{||,..,,|........))},....,}.,)))))}.))))))))}}}}))}||.|{.{{.||||,,.||,,....))...}))).)).)).}}
Forensic Context
No forensic context available.