Forensic RNA Knowledge Base

Basic Information

Symbol

hsa_RAPGEF6_0020000

RNA Class

transcript (circRNA)

Alias

hsa-RAPGEF6_0171

Host gene

RAPGEF6

Type of circRNA

Intron-Exon-Intron

Location (GRCh37)

5:130843764-130883904 UCSC (hg19)

Location (GRCh38)

5:131508071-131548211 UCSC (hg38)

External Database

Generated by RNAfold

Minimum free energy (MFE) structure:
Secondary structure that contributes a minimum of free energy.

Ensemble properties:
Thermodynamic properties of the Boltzmann ensemble.

Minimum free energy

-28.70 kcal/mol

Thermodynamic ensemble

Free Energy: -31.29 kcal/mol

Frequency: 0.0150

Diversity: 42.67

MFE Structure Visualization

MFE Structure Prediction

.....((((((((((....((.(((((...((((.(((((...((.((.(((..(((...((((....))))...)))..))).))..)).....)))))))))))))).))....)))))........)))))...

Thermodynamic Ensemble Prediction

.....((((((((((....((.(((((,.,((((.(((((,.{{{,,,.(({..(((...({((....}))).,.)))..})}.,,,,}}.,,},))))))}})))))).))....)))))......,.)))))...