Basic Information
Symbol
hsa_RAPGEF6_0021100
RNA Class
transcript (circRNA)
Alias
hsa-RAPGEF6_0241
Host gene
RAPGEF6
Type of circRNA
Intron-Exon-Intron
Location (GRCh37)
5:130871692-130899559
UCSC (hg19)
Location (GRCh38)
5:131535999-131563866
UCSC (hg38)
External Database
Secondary Structure
Generated by RNAfold
Minimum free energy (MFE) structure:
Secondary structure that contributes a minimum of free energy.
Secondary structure that contributes a minimum of free energy.
Ensemble properties:
Thermodynamic properties of the Boltzmann ensemble.
Thermodynamic properties of the Boltzmann ensemble.
Minimum free energy
-35.10 kcal/mol
Thermodynamic ensemble
Free Energy:
-41.07 kcal/mol
Frequency:
0.0001
Diversity:
65.80
MFE Structure Visualization
Structure Prediction
MFE Structure Prediction
((.............((((((..(.........)..))))))))(((...............((((((((((.((((((((..(((((..((((((....)))))).)).(((((((.((((.((.....)).)))).))))))))))..)))))))).)....)))))))))...((.(((((.....))))).))..........)))
Thermodynamic Ensemble Prediction
(({{,.......,{{{,,,,,..|,.,,{{{....})))|||,,,..,,,........{{{{(,((((,,,|}|,|,||||}.{((({,,(((((,....}))))}..|||((((((,((((.((.....)).)))).)))))))}))..}}}})))),)..,,)))|,}|||...,,.{((((.....))))).}}..........,.}
Forensic Context
No forensic context available.