Basic Information
Symbol
hsa_RAPGEF6_0022500
RNA Class
transcript (circRNA)
Alias
hsa-RAPGEF6_0153
Host gene
RAPGEF6
Type of circRNA
Intron-Intron
Location (GRCh37)
5:130886435-130886629
UCSC (hg19)
Location (GRCh38)
5:131550742-131550936
UCSC (hg38)
External Database
Secondary Structure
Generated by RNAfold
Minimum free energy (MFE) structure:
Secondary structure that contributes a minimum of free energy.
Secondary structure that contributes a minimum of free energy.
Ensemble properties:
Thermodynamic properties of the Boltzmann ensemble.
Thermodynamic properties of the Boltzmann ensemble.
Minimum free energy
-40.70 kcal/mol
Thermodynamic ensemble
Free Energy:
-44.86 kcal/mol
Frequency:
0.0012
Diversity:
55.08
MFE Structure Visualization
Structure Prediction
MFE Structure Prediction
(..(((((((((.............)))).)))))..)(((((.((((((.(((((..(((...(((.(((...((((.(..(((...(((...(((.(((((.(((((........))))).)))))..)))...)))...)))....).))))...)))..)))..)))..))))).)))))....).)))))
Thermodynamic Ensemble Prediction
(..{(((({{((,.,.{,...,.,.}))),,))))..)(((((.{{((((,(((((..(((...(((.(((...((((.{..(((...({{...{,{.(((((.(((((........))))).)))))..}}}...))).,.)))....,.))))...)))..}})..)))..))))).)))))....,.)))))
Forensic Context
No forensic context available.